Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Blood
Cell type
697
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Lymphocytic

Attributes by original data submitter

Sample

source_name
B-ALL cell line
cell line
697
protocol
ChIPmentation
agent
DEXA
antibody
H3K27ac

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
all libraries were prepared for sequencing using standard Illumina protocols

Sequencing Platform

instrument_model
Illumina HiSeq 4000

hg38

Number of total reads
34297845
Reads aligned (%)
99.3
Duplicates removed (%)
16.2
Number of peaks
12231 (qval < 1E-05)

hg19

Number of total reads
34297845
Reads aligned (%)
99.0
Duplicates removed (%)
16.5
Number of peaks
12264 (qval < 1E-05)

Base call quality data from DBCLS SRA