Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CTCF

Cell type

Cell type Class
Larvae
Cell type
Eye-antennal discs
NA
NA

Attributes by original data submitter

Sample

source_name
Eye-Antennal disc
genotype
CantonS
sample type
CTCF Immunoprecipitated
Stage
Wandering third instar larvae
tissue
Eye-Antennal disc
chip antibody
CTCF

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

dm3

Number of total reads
14181487
Reads aligned (%)
48.1
Duplicates removed (%)
34.5
Number of peaks
6540 (qval < 1E-05)

dm6

Number of total reads
14181487
Reads aligned (%)
47.2
Duplicates removed (%)
35.5
Number of peaks
6815 (qval < 1E-05)

Base call quality data from DBCLS SRA