Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Clamp

Cell type

Cell type Class
Embryo
Cell type
Embryos
NA
NA

Attributes by original data submitter

Sample

source_name
embryo
antibody
CLAMP
nuclear cycle
14
Sex
male
tissue
embryo

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

dm6

Number of total reads
62392803
Reads aligned (%)
33.0
Duplicates removed (%)
77.5
Number of peaks
4903 (qval < 1E-05)

dm3

Number of total reads
62392803
Reads aligned (%)
33.6
Duplicates removed (%)
72.7
Number of peaks
6174 (qval < 1E-05)

Base call quality data from DBCLS SRA