Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
TOP2B

Cell type

Cell type Class
Neural
Cell type
BT142
NA
NA

Attributes by original data submitter

Sample

source_name
BT142 glioma cells
agent
DMSO
genotype
BT142
cell type
glioma cells
chip antibody
TOP2B

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
13762560
Reads aligned (%)
74.8
Duplicates removed (%)
24.9
Number of peaks
32451 (qval < 1E-05)

hg38

Number of total reads
13762560
Reads aligned (%)
75.1
Duplicates removed (%)
24.6
Number of peaks
32438 (qval < 1E-05)

Base call quality data from DBCLS SRA