Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Blood
Cell type
Lymphoblastoid cell line
Tissue
blood
Lineage
mesoderm
Description
parental cell type to lymphoblastoid cell lines

Attributes by original data submitter

Sample

source_name
Lymphoblastoid cell lines
biomaterial_provider
GM18508
cell line
GM18508
antibody
H3K27ac
antibody manufacturer
Abcam
antibody catalog number
AB4729
antibody lot number
730178

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
39461305
Reads aligned (%)
93.5
Duplicates removed (%)
33.1
Number of peaks
37254 (qval < 1E-05)

hg19

Number of total reads
39461305
Reads aligned (%)
93.2
Duplicates removed (%)
33.2
Number of peaks
38324 (qval < 1E-05)

Base call quality data from DBCLS SRA