SRX620449
LP1 BRD4, JQ1 500 nM, 3h

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Blood
Cell type
LP-1
Primary Tissue
Blood
Tissue Diagnosis
Multiple Myeloma

Attributes by original data submitter

Sample

isolate
Not applicable
age
Missing
biomaterial_provider
Louis M. Staudt
sex
Missing
tissue
Peripheral blood
cell_line
LP1
treatment
LP1 BRD4, JQ1 500 nM, 3h

Sequenced DNA Library

library_name
LP1_BRD4_JQ1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
42282456
Reads aligned (%)
86.7
Duplicates removed (%)
24.8
Number of peaks
3785 (qval < 1E-05)

hg19

Number of total reads
42282456
Reads aligned (%)
86.0
Duplicates removed (%)
26.6
Number of peaks
2207 (qval < 1E-05)

Base call quality data from DBCLS SRA