Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Uterus

Cell type

Endometrium

MeSH Description

The mucous membrane lining of the uterine cavity that is hormonally responsive during the MENSTRUAL CYCLE and PREGNANCY. The endometrium undergoes cyclic changes that characterize MENSTRUATION. After successful FERTILIZATION, it serves to sustain the developing embryo.

Sample

source_name

control, input DNA

menstrual cycle phase

none

tissue

endometrium/whole endometrium

chip antibody

none

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Lysates were clarified from sonicated nuclei and PGR-bound DNA were isolated with PGR antibody. True Seq RNA kit

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

33489624

Reads aligned (%)

97.8

Duplicates removed (%)

6.7

Number of peaks

1014 (qval < 1E-05)

hg19

Number of total reads

33489624

Reads aligned (%)

97.3

Duplicates removed (%)

7.7

Number of peaks

1018 (qval < 1E-05)