Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
KLF5

Cell type

Cell type Class
Digestive tract
Cell type
ESO-26
NA
NA

Attributes by original data submitter

Sample

source_name
Esophageal Adenocarcinoma cell line
cell line
Eso26
antibody
KLF5

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Lysates were clarified from sonicated nuclei and protein-DNA complexes were isolated with antibody. Standard Illumina library preparation protocol

Sequencing Platform

instrument_model
Illumina HiSeq 4000

hg19

Number of total reads
24494352
Reads aligned (%)
178.4
Duplicates removed (%)
5.4
Number of peaks
19526 (qval < 1E-05)

hg38

Number of total reads
24494352
Reads aligned (%)
180.2
Duplicates removed (%)
5.3
Number of peaks
19908 (qval < 1E-05)

Base call quality data from DBCLS SRA