Antigen

Antigen Class

TFs and others

Antigen

FOXA1

Cell type

Cell type Class

Breast

Cell type

MCF-7

Primary Tissue

Breast

Site of Extraction

Pleura

Tissue Diagnosis

Adenocarcinoma

Sample

source_name

MCF7-shCTRL-FOXA1_ChIPSeq

cell line

MCF-7

cell type

breast cancer cell line

genotype/variation

shCTRL

chip antibody

FOXA1 (Abcam,ab170933, Lot # GR3257262-1)

Sequenced DNA Library

library_name

ERROR: cannot retrieve data from NCBI: too many requests

library_strategy

ERROR: cannot retrieve data from NCBI: too many requests

library_source

ERROR: cannot retrieve data from NCBI: too many requests

library_selection

ERROR: cannot retrieve data from NCBI: too many requests

library_construction_protocol

ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model

ERROR: cannot retrieve data from NCBI: too many requests

cycle_sequence

ERROR: cannot retrieve data from NCBI: too many requests

cycle_count

ERROR: cannot retrieve data from NCBI: too many requests

flow_sequence

ERROR: cannot retrieve data from NCBI: too many requests

flow_count

ERROR: cannot retrieve data from NCBI: too many requests

key_sequence

ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads

24329684

Reads aligned (%)

96.8

Duplicates removed (%)

7.6

Number of peaks

3968 (qval < 1E-05)

hg38

Number of total reads

24329684

Reads aligned (%)

97.6

Duplicates removed (%)

7.4

Number of peaks

4703 (qval < 1E-05)