Curated Sample Data


Genome
dm3
Antigen Class
Input control
Antigen
Input control
Cell type Class
Cell line
Cell type
OSC

Cell type information


Tissue Source
ovary
Developmental Stage
adult stage

Attributes by Original Data Submitter


source_name
Nxf2-KD OSC
cell type
Ovarian Somatic Cells (OSC)
variation
RNAi Nxf2
chip/clip antibody
--
molecule subtype
genomic DNA

Metadata from Sequence Read Archive

Library Description


library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
not provided

Platform Information


instrument_model
Illumina MiSeq

External Database Query

Logs in read processing pipeline


Number of total reads
2698874
Reads aligned (%)
82.0
Duplicates removed (%)
3.4
Number of peaks
376 (qval < 1E-05)

Sequence Quality Data from DBCLS SRA