Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
TP53

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
Acute myeloid leukemia cell line
disease state
AML
cell line
K562
genotype
Y220C
treatment
Daunorubicin
chip antibody
anti-p53 (mAB clone DO-1, abcam, #1101)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
28186834
Reads aligned (%)
103.2
Duplicates removed (%)
47.5
Number of peaks
539 (qval < 1E-05)

hg38

Number of total reads
28186834
Reads aligned (%)
105.8
Duplicates removed (%)
46.6
Number of peaks
642 (qval < 1E-05)

Base call quality data from DBCLS SRA