Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Gonad
Cell type
N2102Ep
NA
NA

Attributes by original data submitter

Sample

source_name
Human testicular germ cell tumour cell line
cell line
2102EP
cell type
Embryonal carcinoma-like cells
chip antibody
None

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
26596105
Reads aligned (%)
96.5
Duplicates removed (%)
9.9
Number of peaks
608 (qval < 1E-05)

hg19

Number of total reads
26596105
Reads aligned (%)
95.7
Duplicates removed (%)
11.3
Number of peaks
576 (qval < 1E-05)

Base call quality data from DBCLS SRA