Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
ELL2

Cell type

Cell type Class
Uterus
Cell type
HeLa
Primary Tissue
Cervix
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

source_name
HeLa
cell line
HeLa
treatment
ELL2 was profiled in a Hela cell clone upon EGF stimulation and depletion of INTS11
antibody
non-commercial rabbit anti-ELL2 Ref PMID 20159561
source
IP with non-commercial rabbit anti-ELL2 Ref PMID 20159561
sample type
ChIP-seq

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChIP-Seq DNA Sample Prep Kit (Illumina, inc.)

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg19

Number of total reads
21519980
Reads aligned (%)
92.7
Duplicates removed (%)
3.9
Number of peaks
1519 (qval < 1E-05)

hg38

Number of total reads
21519980
Reads aligned (%)
94.6
Duplicates removed (%)
2.6
Number of peaks
1592 (qval < 1E-05)

Base call quality data from DBCLS SRA