SRX5706702
EC 040 HUVEC ChIP-seq Input

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Cardiovascular
Cell type
HUVEC
Primary Tissue
Umbilical Cord
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

isolate
JTK042
age
newborn
biomaterial_provider
Lifeline Cell Technology
sex
male
tissue
Umbilical vein
cell_type
Umbilical vein endothelial cells
race
Caucasian
sample_type
cell culture

Sequenced DNA Library

library_name
EC40_Input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
101417630
Reads aligned (%)
99.1
Duplicates removed (%)
6.2
Number of peaks
2572 (qval < 1E-05)

hg19

Number of total reads
101417630
Reads aligned (%)
98.3
Duplicates removed (%)
7.9
Number of peaks
1838 (qval < 1E-05)

Base call quality data from DBCLS SRA