Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
pho

Cell type

Cell type Class
Embryo
Cell type
Mesoderm
NA
NA

Attributes by original data submitter

Sample

source_name
mesoderm stage 14-17
genotype/variation
twi-INTACT, Mef2>Nslmb,GFP-Ubx
developmental stage
mesoderm stage 14-17
cell type
mesoderm
chip antibody
Rb-Pho 2-382 (gift from Jürg Müller)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

dm6

Number of total reads
40141682
Reads aligned (%)
87.6
Duplicates removed (%)
53.1
Number of peaks
4156 (qval < 1E-05)

dm3

Number of total reads
40141682
Reads aligned (%)
88.4
Duplicates removed (%)
50.4
Number of peaks
2901 (qval < 1E-05)

Base call quality data from DBCLS SRA