GSM3689927: CutRun-27-minus-IAA; Homo sapiens; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
Unclassified
Antigen
Unclassified
Cell type
Cell type Class
Blood
Cell type
SEM
Primary Tissue
Blood
Tissue Diagnosis
Leukemia
Attributes by original data submitter
Sample
source_name
B cell precursor leukemia
cell type
B cell precursor leukemia
strain
SEM
tissue
B cell precursor leukemia
genotype/variation
Clone 27 minus IAA
Sequenced DNA Library
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Cut&Run ChiP-seq was performed according the the protocol in, Skene PJ, Henikoff S. 2017. An efficient targeted nuclease strategy for high-resolution mapping of DNA binding sites on Elife. Antibodies against CTCF for a pulldown assay. CTCF antibody from (abcam, ab70303) was used for immunoprecipitation. NEBNext Ultra II DNA Library Prep Kit from New England Biolabs (E7645S) Cut&Run ChiP-seq