Antigen

Antigen Class

TFs and others

Antigen

SPI1

Cell type

Cell type Class

Blood

Cell type

THP-1

Primary Tissue

Blood

Tissue Diagnosis

Leukemia Acute Myelogenous

Sample

source_name

THP-1-PMAVD3_PU.1-ChIP

cell line

THP-1

tissue/cell type

acute monocytic leukemia cell line treated with PMA and Vitamin D3

chip antibody

PU.1 (Santa Cruz, #sc-352X)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

ChIPseq was essentially done as described (Pham et al. 2012). Libraries were generated as described (Pham et al. 2012)

Sequencing Platform

instrument_model

Illumina HiSeq 1000

hg19

Number of total reads

34640311

Reads aligned (%)

71.2

Duplicates removed (%)

27.1

Number of peaks

120125 (qval < 1E-05)

hg38

Number of total reads

34640311

Reads aligned (%)

72.1

Duplicates removed (%)

26.6

Number of peaks

120541 (qval < 1E-05)