Antigen

Antigen Class

TFs and others

Antigen

Epitope tags

Cell type

Cell type Class

Blood

Cell type

Dendritic Cells

MeSH Description

ANTIGEN-PRESENTING CELLS of dendritic cell morphology found in the LYMPH NODES and other lymphoid tissues.

Sample

source_name

DC96h_FLAG-ChIP

donr id

donorM

tissue/cell type

MO-derived

cell subtype

primary monocyte-derived dendritic cells

chip antibody

FLAG (Sigma, #F3165)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

ChIPseq was essentially done as described (Pham et al. 2012). Libraries were generated as described (Pham et al. 2012)

Sequencing Platform

instrument_model

Illumina HiSeq 3000

hg38

Number of total reads

21463787

Reads aligned (%)

92.2

Duplicates removed (%)

36.4

Number of peaks

808 (qval < 1E-05)

hg19

Number of total reads

21463787

Reads aligned (%)

91.1

Duplicates removed (%)

37.7

Number of peaks

812 (qval < 1E-05)