Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
SPI1

Cell type

Cell type Class
Blood
Cell type
Neutrophils
MeSH Description
Immature neutrophils.

Attributes by original data submitter

Sample

source_name
NEU_PU.1-ChIP
donr id
donorF
tissue/cell type
peripheral blood
cell subtype
primary neutrophils
chip antibody
PU.1 (Santa Cruz, #sc-352X)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChIPseq was essentially done as described (Pham et al. 2012). Libraries were generated as described (Pham et al. 2012)

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
40726771
Reads aligned (%)
39.2
Duplicates removed (%)
59.7
Number of peaks
40531 (qval < 1E-05)

hg38

Number of total reads
40726771
Reads aligned (%)
41.0
Duplicates removed (%)
58.0
Number of peaks
39479 (qval < 1E-05)

Base call quality data from DBCLS SRA