Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
RNF2

Cell type

Cell type Class
Blood
Cell type
ME-1
Primary Tissue
Bone Marrow
Tissue Diagnosis
Leukemia Acute Myelogenous

Attributes by original data submitter

Sample

source_name
ME-1
cell line
ME-1
cell type
acute myeloid leukemia (AML) cell line
genotype/variation
harbouring a dox inducible CBFB-MYH11 knockdown construct
treatment
600 ng/ml doxycycline
antibody
RING1B D139-3 MBL Life Science

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
13682356
Reads aligned (%)
183.2
Duplicates removed (%)
5.5
Number of peaks
15934 (qval < 1E-05)

hg38

Number of total reads
13682356
Reads aligned (%)
184.7
Duplicates removed (%)
5.4
Number of peaks
16065 (qval < 1E-05)

Base call quality data from DBCLS SRA