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For hg19
BigWig
Peak-call (q < 1E-05)
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For hg38
BigWig
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Peak-call (q < 1E-10)
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For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
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For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: MYC
wikigenes
PDBj
CellType: HCT 116
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
SRX5547218
GSM3680684: MYC doxo 1; Homo sapiens; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
MYC
Cell type
Cell type Class
Digestive tract
Cell type
HCT 116
Primary Tissue
Colon
Tissue Diagnosis
Carcinoma
Attributes by original data submitter
Sample
source_name
HCT116 cells
cell line
HCT116
replicate
1
treatment
Dox 500 nM
chip antibody
c-Myc (ab32072)
Sequenced DNA Library
No library information was found.
Sequencing Platform
No platform information was found.
Where can I get the processing logs?
Read processing pipeline
log
hg19
Number of total reads
64757525
Reads aligned (%)
88.8
Duplicates removed (%)
9.4
Number of peaks
816 (qval < 1E-05)
hg38
Number of total reads
64757525
Reads aligned (%)
91.1
Duplicates removed (%)
7.8
Number of peaks
838 (qval < 1E-05)
Base call quality data from
DBCLS SRA