Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
DDX21

Cell type

Cell type Class
Epidermis
Cell type
A-375
Primary Tissue
Skin
Tissue Diagnosis
Melanoma

Attributes by original data submitter

Sample

source_name
A375 cell lines
chip antibody
DDX21 Novus Biologicals NB100-17-18

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
31487536
Reads aligned (%)
98.2
Duplicates removed (%)
14.4
Number of peaks
8634 (qval < 1E-05)

hg19

Number of total reads
31487536
Reads aligned (%)
97.7
Duplicates removed (%)
15.5
Number of peaks
8575 (qval < 1E-05)

Base call quality data from DBCLS SRA