SRX5446063
k562 p95H si PolII-Ser2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

isolate
k562_p95H_si_PolII-Ser2
age
50
biomaterial_provider
Omar Abdel-Wahab MSKCC HOPP 1275 York Ave New York NY
sex
male
tissue
cell lines
cell_line
K562

Sequenced DNA Library

library_name
k562_p95H_si_PolII-Ser2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
49020178
Reads aligned (%)
97.5
Duplicates removed (%)
47.5
Number of peaks
1349 (qval < 1E-05)

hg19

Number of total reads
49020178
Reads aligned (%)
96.7
Duplicates removed (%)
49.3
Number of peaks
1279 (qval < 1E-05)

Base call quality data from DBCLS SRA