Curated Sample Data


Genome
ce10
Antigen Class
Histone
Antigen
H3K4me3
Cell type Class
Larvae
Cell type
L1

Cell type information


NA
NA

Attributes by Original Data Submitter


source_name
H3K4me3 lin37 20C
developmental stage
L1
genotype
lin-37(n758)
temperature
20C
chip antibody
Fujifilm Wako MABI0304, #305–34819
input control
Input lin37 20C rep2
extract_protocol
Method 2

Metadata from Sequence Read Archive

Library Description


library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Platform Information


instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

External Database Query

Logs in read processing pipeline


Number of total reads
22553583
Reads aligned (%)
88.8
Duplicates removed (%)
28.4
Number of peaks
5366 (qval < 1E-05)

Sequence Quality Data from DBCLS SRA