Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

isolate
edited cells
age
not applicable
biomaterial_provider
Berkeley Tissue Culture Facility
sex
female
tissue
not applicable
cell_line
K562
cell_subtype
17
treatment
BW19_hg38_k562_rnf2_mre11

Sequenced DNA Library

library_name
BW19_hg38_k562_rnf2_mre11
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina MiSeq

hg38

Number of total reads
12820067
Reads aligned (%)
81.3
Duplicates removed (%)
12.0
Number of peaks
372 (qval < 1E-05)

hg19

Number of total reads
12820067
Reads aligned (%)
80.3
Duplicates removed (%)
12.2
Number of peaks
189 (qval < 1E-05)

Base call quality data from DBCLS SRA