Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Blood

Cell type

K-562

Primary Tissue

Blood

Tissue Diagnosis

Leukemia Chronic Myelogenous

Sample

source_name

K562

cell line

K562

chip antibody

None

condition

Control

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Chromatin preparation for K652 was performed according to Arrigoni et al., 2016 (Arrigoni, Richter et al. 2016). Chromatin Immunoprecipitation was performed as previously described (Lee, Johnstone et al. 2006).

Sequencing Platform

instrument_model

Illumina HiSeq 3000

hg38

Number of total reads

94219991

Reads aligned (%)

95.0

Duplicates removed (%)

6.0

Number of peaks

43404 (qval < 1E-05)

hg19

Number of total reads

94219991

Reads aligned (%)

94.7

Duplicates removed (%)

6.1

Number of peaks

43756 (qval < 1E-05)