Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Adult
Cell type
Ovary
NA
NA

Attributes by original data submitter

Sample

strain
w[1]; Sp/CyO; nanos-Gal4/UASp-GFP-mel-cuff
age
2-4 days
sex
female
tissue
ovary
sample_type
DNA
custom name
RNA Pol-II ChIP from nosG-GFP-mel-cuff ovary

Sequenced DNA Library

library_name
RNA Pol-II ChIP in nanos-Gal4-mel-cuff ovary replicate 1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
NextSeq 500

dm6

Number of total reads
13798366
Reads aligned (%)
82.5
Duplicates removed (%)
42.1
Number of peaks
7188 (qval < 1E-05)

dm3

Number of total reads
13798366
Reads aligned (%)
85.5
Duplicates removed (%)
40.2
Number of peaks
7134 (qval < 1E-05)

Base call quality data from DBCLS SRA