Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Blood
Cell type
HPC-7
NA
NA

Attributes by original data submitter

Sample

source_name
Hematopoietic progenitors
cell line
HPC7
cell type
Hematopoietic progenitors
treatment
no treatment
chip antibody
H3K27ac
vendor
abcam

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
21994047
Reads aligned (%)
78.5
Duplicates removed (%)
14.3
Number of peaks
32119 (qval < 1E-05)

mm9

Number of total reads
21994047
Reads aligned (%)
78.4
Duplicates removed (%)
14.2
Number of peaks
32109 (qval < 1E-05)

Base call quality data from DBCLS SRA