Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
O-GlcNAc

Cell type

Cell type Class
Larvae
Cell type
Larvae
NA
NA

Attributes by original data submitter

Sample

source_name
O-GlcNAc-seq_wt larvae_150uM GalNAz media for 36h followed by 16h growth on DMSO media
strain background
Oregon R
genotype/variation
wild type
stage/tissue
larvae
chip strategy
GalNAz feeding, strain-promoted click reaction and streptavidin purification

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

dm6

Number of total reads
6862148
Reads aligned (%)
88.6
Duplicates removed (%)
9.3
Number of peaks
1838 (qval < 1E-05)

dm3

Number of total reads
6862148
Reads aligned (%)
91.4
Duplicates removed (%)
9.9
Number of peaks
2114 (qval < 1E-05)

Base call quality data from DBCLS SRA