Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
ARID1A

Cell type

Cell type Class
Uterus
Cell type
Endometrial epithelial cells
NA
NA

Attributes by original data submitter

Sample

source_name
endometrial epithelial cells
cell type
endometrial epithelial cells
genotype
ARID1A KO
biological replicate
1
technical replicate
1
chip antibody
ARID1A (CST, #12354)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
35170112
Reads aligned (%)
81.9
Duplicates removed (%)
13.2
Number of peaks
956 (qval < 1E-05)

hg38

Number of total reads
35170112
Reads aligned (%)
84.2
Duplicates removed (%)
11.5
Number of peaks
1451 (qval < 1E-05)

Base call quality data from DBCLS SRA