Antigen

Antigen Class

Histone

Antigen

H3K4me3

Cell type

Cell type Class

Pluripotent stem cell

Cell type

iPS cells

NA

NA

Sample

source_name

iPSCs

cell type

iPSCs

treatment

CBP-30

donor

1

chip antibody

H3K4me3

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Lysates were clarified from sonicated nuclei and histone-DNA complexes were isolated with antibody.

Sequencing Platform

instrument_model

NextSeq 500

hg38

Number of total reads

10775031

Reads aligned (%)

89.0

Duplicates removed (%)

1.5

Number of peaks

27301 (qval < 1E-05)

hg19

Number of total reads

10775031

Reads aligned (%)

88.9

Duplicates removed (%)

1.5

Number of peaks

27189 (qval < 1E-05)