Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
KDM6A

Cell type

Cell type Class
Blood
Cell type
Bone marrow nuclear cells
NA
NA

Attributes by original data submitter

Sample

source_name
AML patient 1 bone marrow nuclear cells
tissue
Bone marrow
chip antibody
KDM6A (Bethyl Laboratories, Cat. A302-374A)
cell type
bone marrow nuclear cells
disease state
acute myeloid leukemia

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
31096139
Reads aligned (%)
98.5
Duplicates removed (%)
37.1
Number of peaks
1062 (qval < 1E-05)

hg19

Number of total reads
31096139
Reads aligned (%)
97.3
Duplicates removed (%)
37.6
Number of peaks
487 (qval < 1E-05)

Base call quality data from DBCLS SRA