Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
KDM6B

Cell type

Cell type Class
Blood
Cell type
CUTLL1
NA
NA

Attributes by original data submitter

Sample

source_name
ChIP-SEQ_JMJD3 CUTLL1
cell line
CUTLL1
cell type
human T cell leukemia cells
chip antibody
JMJD3
chip antibody vendor
abgent

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
42822421
Reads aligned (%)
98.8
Duplicates removed (%)
9.7
Number of peaks
1302 (qval < 1E-05)

hg19

Number of total reads
42822421
Reads aligned (%)
98.1
Duplicates removed (%)
11.1
Number of peaks
1272 (qval < 1E-05)

Base call quality data from DBCLS SRA