Antigen

Antigen Class

TFs and others

Antigen

KDM6B

Cell type

Cell type Class

Blood

Cell type

CUTLL1

NA

NA

Sample

source_name

ChIP-SEQ_JMJD3 CUTLL1

cell line

CUTLL1

cell type

human T cell leukemia cells

chip antibody

JMJD3

chip antibody vendor

abgent

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

JMJD3 ChIP: 10 million cells were used for the ChIP and precipitated using 10micrograms of antibody against human JMJD3. Libraries were generated as described before, including end-repair, A-tailing, adapter (Illumina Truseq system) ligation and PCR amplification.

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

30786484

Reads aligned (%)

88.2

Duplicates removed (%)

30.8

Number of peaks

16810 (qval < 1E-05)

hg19

Number of total reads

30786484

Reads aligned (%)

87.6

Duplicates removed (%)

31.6

Number of peaks

16633 (qval < 1E-05)