Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Embryo
Cell type
Forelimb
MeSH Description
A front limb of a quadruped. (The Random House College Dictionary, 1980)

Attributes by original data submitter

Sample

source_name
forelimb bud
developmental stage
e12.5
tissue
forelimb bud
tissue region
distal
strain
mixed background C57Bl/6 x 129
genotype
WT
antibody
H3K27ac Abcam: ab-4731

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
94474414
Reads aligned (%)
98.0
Duplicates removed (%)
3.7
Number of peaks
48274 (qval < 1E-05)

mm9

Number of total reads
94474414
Reads aligned (%)
97.9
Duplicates removed (%)
3.8
Number of peaks
48324 (qval < 1E-05)

Base call quality data from DBCLS SRA