Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
STAT3

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

source_name
Naïve B cell stimulated by α-IgM 10ug/ml for 24hrs
antibody
STAT3
agent
alpha-IgM
cell type
Naive B cell

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChIP experiments are followed by Rui et al., 2016, PNAS 113(46): E7260-E7267 ChIP library was construbuted by using the Ovation Ultralow Library Kit (NuGen, Part No. 0330)

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg19

Number of total reads
22434983
Reads aligned (%)
93.5
Duplicates removed (%)
3.8
Number of peaks
838 (qval < 1E-05)

hg38

Number of total reads
22434983
Reads aligned (%)
94.9
Duplicates removed (%)
3.2
Number of peaks
663 (qval < 1E-05)

Base call quality data from DBCLS SRA