Antigen

Antigen Class

TFs and others

Antigen

ARID1A

Cell type

Cell type Class

Breast

Cell type

MCF-7

Primary Tissue

Breast

Site of Extraction

Pleura

Tissue Diagnosis

Adenocarcinoma

Sample

source_name

ARID1A ChIP-seq 4-hydroxy Tamoxifen

cell line

MCF7

cell type

ER+ Breast Cancer Cell Line

passages

20-35

treatment

100 nM 4-hydroxy tamoxifen for 6 hours

chip antibody

ARID1A HPA005456

Sequenced DNA Library

library_name

ERROR: cannot retrieve data from NCBI: too many requests

library_strategy

ERROR: cannot retrieve data from NCBI: too many requests

library_source

ERROR: cannot retrieve data from NCBI: too many requests

library_selection

ERROR: cannot retrieve data from NCBI: too many requests

library_construction_protocol

ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model

ERROR: cannot retrieve data from NCBI: too many requests

cycle_sequence

ERROR: cannot retrieve data from NCBI: too many requests

cycle_count

ERROR: cannot retrieve data from NCBI: too many requests

flow_sequence

ERROR: cannot retrieve data from NCBI: too many requests

flow_count

ERROR: cannot retrieve data from NCBI: too many requests

key_sequence

ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads

35351882

Reads aligned (%)

99.3

Duplicates removed (%)

21.6

Number of peaks

34415 (qval < 1E-05)

hg19

Number of total reads

35351882

Reads aligned (%)

98.8

Duplicates removed (%)

22.1

Number of peaks

34845 (qval < 1E-05)