Antigen

Antigen Class

TFs and others

Antigen

ZBTB7A

Cell type

Cell type Class

Prostate

Cell type

VCaP

Primary Tissue

Prostate

Tissue Diagnosis

Carcinoma

Sample

source_name

VCAP

cell line

prostate cancer cell line VCAP

culture condition

DHT

chip antibody

Human/Mouse ZBTB7A/Pokemon Antibody (R&D Systems, catalog# MAB3496, lot# CDOR0109121)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

ChIP DNA was collected according to the ChIP protocol in the paper's methods section. ThruPLEX® DNA-seq 48D Kit (Rubicon Genomics) was used for ChIP-Seq library construction.

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

12217163

Reads aligned (%)

82.2

Duplicates removed (%)

79.4

Number of peaks

1772 (qval < 1E-05)

hg19

Number of total reads

12217163

Reads aligned (%)

81.8

Duplicates removed (%)

80.2

Number of peaks

1794 (qval < 1E-05)