Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
KMT2C

Cell type

Cell type Class
Gonad
Cell type
BIN-67
NA
NA

Attributes by original data submitter

Sample

source_name
BIN-67 (SCCOHT)
lentivirus
SMARACA4.T910M
cell line
BIN-67
chip antibody
MLL3, homemade (PMID: 29404406)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
40966444
Reads aligned (%)
92.0
Duplicates removed (%)
88.9
Number of peaks
388 (qval < 1E-05)

hg19

Number of total reads
40966444
Reads aligned (%)
91.1
Duplicates removed (%)
90.5
Number of peaks
318 (qval < 1E-05)

Base call quality data from DBCLS SRA