Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me2

Cell type

Cell type Class
Blood
Cell type
Hematopoietic progenitors
NA
NA

Attributes by original data submitter

Sample

source_name
MLL-AF9 I-BET resistant cells
strain background
C57BL/6
tissue source
haematopoietic progenitors
cell line
MLL-AF9
cell phenotype
I-BET Resistant
shRNA
Pu.1 Scrambled
treatment
DMSO
chip antibody
anti-H3K4me2 (ab32356, Abcam)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
20108382
Reads aligned (%)
97.4
Duplicates removed (%)
7.7
Number of peaks
43299 (qval < 1E-05)

mm9

Number of total reads
20108382
Reads aligned (%)
97.3
Duplicates removed (%)
7.8
Number of peaks
43270 (qval < 1E-05)

Base call quality data from DBCLS SRA