Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Blood
Cell type
CD34+
NA
NA

Attributes by original data submitter

Sample

sample_id
TR4PL29_20C
isolate
IF0123
age
86 years
biomaterial_provider
INForMeD Study - Mead Lab
sex
male
tissue
Peripheral Blood
cell_type
cd34+
health_state
patient
disease
myelofibrosis
disease_stage
baseline
sample_type
singlecell
treatment
Ruxolitinib
primer.mix
IF0123_mix
batch
batch_2
plate
TR4PL29
pool
TR4PL29_Q3
CD45RA
1739.89
CD90
2813.796
CD38
4681.934
lineage.viability
8939.614
CD34
47976.27
CD123
4477.752
genotypesall
JAK2_HOM_SF3B1_HET

Sequenced DNA Library

library_name
BMDMs-ChIP-Mock
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
HiSeq X Ten

hg38

Number of total reads
39298714
Reads aligned (%)
0.7
Duplicates removed (%)
2.9
Number of peaks
382 (qval < 1E-05)

hg19

Number of total reads
39298714
Reads aligned (%)
0.7
Duplicates removed (%)
3.5
Number of peaks
354 (qval < 1E-05)

Base call quality data from DBCLS SRA