Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Abd-B

Cell type

Cell type Class
Larvae
Cell type
3rd instar
NA
NA

Attributes by original data submitter

Sample

source_name
Abd-B-GFP_W3L_ChIP-seq_ChIP_Rep1
strain
Abd-B-GFP
developmental stage
L3
genotype
w; PBac{y[+]-attP-3B}VK00037
Sex
Unknown
transgene
Abd-B genomic coding region with stop codon replaced with GFP

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

dm6

Number of total reads
23779885
Reads aligned (%)
88.3
Duplicates removed (%)
23.5
Number of peaks
0 (qval < 1E-05)

dm3

Number of total reads
23779885
Reads aligned (%)
88.4
Duplicates removed (%)
23.0
Number of peaks
0 (qval < 1E-05)

Base call quality data from DBCLS SRA