Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
sdc-1

Cell type

Cell type Class
Embryo
Cell type
Mixed embryo
NA
NA

Attributes by original data submitter

Sample

source_name
seq-SDQ3856_SDC1_N2_Mxemb_ChIP_Rep1
strain
N2
developmental stage
Mixed Embryo
genotype
wild type
sex type
mixed Male and Hermaphrodite population

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

ce10

Number of total reads
12939172
Reads aligned (%)
66.8
Duplicates removed (%)
30.2
Number of peaks
970 (qval < 1E-05)

ce11

Number of total reads
12939172
Reads aligned (%)
66.8
Duplicates removed (%)
30.2
Number of peaks
955 (qval < 1E-05)

Base call quality data from DBCLS SRA