Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
TP53

Cell type

Cell type Class
Epidermis
Cell type
GM06170
NA
NA

Attributes by original data submitter

Sample

source_name
Fetal skin fibroblasts
biomaterial_provider
GM06170
chip antibody
p53
treatment
0.2 ug/ml Doxorubicin 12 hours
cell line
GM06170

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
RNA: TriZol / ChIP: Immunopurification of DNA followed by phenol:chloroform extraction Illumina TruSeq

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg19

Number of total reads
20886529
Reads aligned (%)
63.3
Duplicates removed (%)
34.5
Number of peaks
4423 (qval < 1E-05)

hg38

Number of total reads
20886529
Reads aligned (%)
64.7
Duplicates removed (%)
33.4
Number of peaks
4357 (qval < 1E-05)

Base call quality data from DBCLS SRA