Antigen

Antigen Class

DNase-seq

Antigen

DNase-Seq

Cell type

Cell type Class

Others

Cell type

Fibroblasts

NA

NA

Sample

source_name

twin 2_euploid_fetal primary fibroblasts_DNaseI

disease

Euploid

tissue

Fetal primary fibroblasts

Sequenced DNA Library

library_strategy

DNase-Hypersensitivity

library_source

GENOMIC

library_selection

DNase

library_construction_protocol

Refer to the Nuclei isolation section of John et.al. Current Protocols in Molecular Biology PMID: 23821440 Illumina TruSeq v2

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

78804513

Reads aligned (%)

81.2

Duplicates removed (%)

28.2

Number of peaks

165086 (qval < 1E-05)

hg19

Number of total reads

78804513

Reads aligned (%)

80.7

Duplicates removed (%)

29.3

Number of peaks

164380 (qval < 1E-05)