Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Rbp1

Cell type

Cell type Class
Cell line
Cell type
S2R+
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
ChIP Seq of total Pol II in Mago Knockdown condition (earlier passage)
cell line
S2R+ Cells
cell type
Embryonic
genotype/variation
Mago Knockdown
chip antibody
RBP1 (Diagenode Cat No-15200004) / Lot No 001-11

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

dm3

Number of total reads
13032647
Reads aligned (%)
97.4
Duplicates removed (%)
11.6
Number of peaks
7236 (qval < 1E-05)

dm6

Number of total reads
13032647
Reads aligned (%)
97.2
Duplicates removed (%)
13.5
Number of peaks
7029 (qval < 1E-05)

Base call quality data from DBCLS SRA