Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
LMNA

Cell type

Cell type Class
Cardiovascular
Cell type
Myocytes, Cardiac
MeSH Description
Striated muscle cells found in the heart. They are derived from cardiac myoblasts (MYOBLASTS, CARDIAC).

Attributes by original data submitter

Sample

source_name
PCM1 positive cardiac myocyte nuclei
Sex
male
age
49
group
DCM
antibody
anti LMNA A/C

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
68582409
Reads aligned (%)
86.0
Duplicates removed (%)
44.4
Number of peaks
2345 (qval < 1E-05)

hg19

Number of total reads
68582409
Reads aligned (%)
85.1
Duplicates removed (%)
46.0
Number of peaks
2150 (qval < 1E-05)

Base call quality data from DBCLS SRA