Antigen

Antigen Class

Histone

Antigen

H3K4me1

Cell type

Cell type Class

Breast

Cell type

MCF-7

Primary Tissue

Breast

Site of Extraction

Pleura

Tissue Diagnosis

Adenocarcinoma

Sample

source_name

MCF7 cells

cell line

MCF7

cell type

Breast cancer cell

genotype/variation

Parental cells

passages

Low passages (6-10)

chip antibody

anti-H3K4me1 (homemade)

Sequenced DNA Library

library_name

ERROR: cannot retrieve data from NCBI: too many requests

library_strategy

ERROR: cannot retrieve data from NCBI: too many requests

library_source

ERROR: cannot retrieve data from NCBI: too many requests

library_selection

ERROR: cannot retrieve data from NCBI: too many requests

library_construction_protocol

ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model

ERROR: cannot retrieve data from NCBI: too many requests

cycle_sequence

ERROR: cannot retrieve data from NCBI: too many requests

cycle_count

ERROR: cannot retrieve data from NCBI: too many requests

flow_sequence

ERROR: cannot retrieve data from NCBI: too many requests

flow_count

ERROR: cannot retrieve data from NCBI: too many requests

key_sequence

ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads

30824065

Reads aligned (%)

96.6

Duplicates removed (%)

7.8

Number of peaks

33557 (qval < 1E-05)

hg19

Number of total reads

30824065

Reads aligned (%)

96.4

Duplicates removed (%)

7.9

Number of peaks

33372 (qval < 1E-05)