Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
BRD4

Cell type

Cell type Class
Blood
Cell type
Chronic myeloid leukemia
NA
NA

Attributes by original data submitter

Sample

source_name
CML cells
cell type
Chronic Myelogenous Leukemia
chip antibody
BRD4 (Bethyl labs #A301-985A)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
53532688
Reads aligned (%)
90.7
Duplicates removed (%)
7.7
Number of peaks
812 (qval < 1E-05)

hg38

Number of total reads
53532688
Reads aligned (%)
93.5
Duplicates removed (%)
5.7
Number of peaks
898 (qval < 1E-05)

Base call quality data from DBCLS SRA