Antigen

Antigen Class

TFs and others

Antigen

ZBTB33

Cell type

Cell type Class

Blood

Cell type

GM12878

Tissue

blood

Lineage

mesoderm

Description

B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus

Sample

source_name

GM12878

biomaterial_provider

GM12878

chip-antibody

mouse monoclonal Kaiso/ZBTB33, Santa Cruz sc-23871

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Cells were fixed using 1% formaldehyde or 1% formaldehyde at 37C Libraries were generated following Illumina's DNA Sample Prep Kit protocol

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

23724093

Reads aligned (%)

93.1

Duplicates removed (%)

7.7

Number of peaks

1963 (qval < 1E-05)

hg19

Number of total reads

23724093

Reads aligned (%)

91.9

Duplicates removed (%)

8.5

Number of peaks

2132 (qval < 1E-05)